C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SUMO2 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405924 SUMO2P12-001 ENSG00000218893 9606 + 6:12319453-12319592 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalTestisENST00000405924
Transcript ID Adrenal Testis
ENST00000405924 0.126±0.00 0.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y7 CIL_0008Y7_0001 VISTA 6:11945112-12546099
CIL_0003IC CIL_0003IC_0001 CGP 6:12290363-13290484

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121569 Smt3h2-ps4-001 processed_pseudogene Mus_musculus 1.99993e-41 171
ENSMUST00000117664 Gm10241-001 processed_pseudogene Mus_musculus 1.99993e-41 171
ENSMUST00000153892 Sumo2-001 protein_coding Mus_musculus 1.99993e-41 171
ENSMUST00000117589 Sumo2-004 protein_coding Mus_musculus 1.99993e-41 171
ENSMUST00000121185 Sumo2-003 protein_coding Mus_musculus 1.99993e-41 171
ENSMUST00000118989 Gm13690-001 processed_pseudogene Mus_musculus 7.00005e-41 169
ENSMUST00000021084 Sumo2-002 nonsense_mediated_decay Mus_musculus 7.00005e-41 169
ENSMUST00000119738 Gm12335-001 processed_pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000121366 Gm13430-001 processed_pseudogene Mus_musculus 8.99999e-40 165

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