C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391491 RPL15P3-001 ENSG00000212802 9606 + 6:12514110-12514724 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000391491
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000391491 0.064±0.00 0.034±0.00 1.127±1.01 0.583±0.55 0.463±0.27 0.490±0.00 0.280±0.24 0.240±0.18 0.319±0.22 0.030±0.00 0.970±0.65 0.447±0.25 0.081±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y7 CIL_0008Y7_0001 VISTA 6:11945112-12546099
CIL_0003IC CIL_0003IC_0001 CGP 6:12290363-13290484

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 887
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 887
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 887
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 887
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 881
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 881
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 760
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 431
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 0 207

Loading