C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11765
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121173 Gm11765-001 ENSMUSG00000081391 10090 - 4:81455943-81461732 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000121173
Transcript ID Adrenal Ovary
ENSMUST00000121173 0.084±0.00 0.136±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AW CIL_0009AW_0002 VISTA 4:81168204-81769895
CIL_000746 CIL_000746_0002 CGP 4:81278500-82705750

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216146 RPL3-001 protein_coding Homo_sapiens 0 1003
ENST00000401609 RPL3-003 protein_coding Homo_sapiens 0 1003
ENST00000402527 RPL3-009 protein_coding Homo_sapiens 0 837
ENST00000417878 RPL3P7-001 processed_pseudogene Homo_sapiens 0 904
ENST00000420536 RPL3-014 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000427905 RPL3-011 protein_coding Homo_sapiens 0 577
ENST00000436852 RPL3P12-001 processed_pseudogene Homo_sapiens 0 708
ENST00000453303 RPL3-012 protein_coding Homo_sapiens 0 708
ENST00000460589 RPL3-010 retained_intron Homo_sapiens 0 313
ENST00000465618 RPL3-002 processed_transcript Homo_sapiens 0 311
ENST00000484615 RPL3-013 retained_intron Homo_sapiens 0 313

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