C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium large conductance calcium-activated channel, subfamily M, alpha member 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000122557 kcnma1a-201 ENSDARG00000079840 7955 + 13:16571581-16938070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000122557
Transcript ID Brain Heart Muscle
ENSDART00000122557 16.903±13.64 0.048±0.03 0.804±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0015269 IEA calcium-activated potassium channel activity
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065788 Kcnma1-201 protein_coding Mus_musculus 0 2006
ENSMUST00000074983 Kcnma1-202 protein_coding Mus_musculus 0 1432
ENSMUST00000100831 Kcnma1-203 protein_coding Mus_musculus 0 1432
ENSMUST00000112423 Kcnma1-204 protein_coding Mus_musculus 0 1953
ENSMUST00000163322 Kcnma1-205 protein_coding Mus_musculus 0 1877
ENSMUST00000172099 Kcnma1-206 protein_coding Mus_musculus 0 1432
ENSMUST00000177634 Kcnma1-207 protein_coding Mus_musculus 0 2704
ENSMUST00000179097 Kcnma1-208 protein_coding Mus_musculus 0 2734
ENSMUST00000179836 Kcnma1-209 protein_coding Mus_musculus 0 1053
ENSMUST00000188210 Kcnma1-001 protein_coding Mus_musculus 0 2614
ENSMUST00000188285 Kcnma1-003 protein_coding Mus_musculus 0 1500
ENSMUST00000188991 Kcnma1-006 protein_coding Mus_musculus 0 1539
ENSMUST00000190044 Kcnma1-005 protein_coding Mus_musculus 0 2111
ENSMUST00000190985 Kcnma1-004 nonsense_mediated_decay Mus_musculus 0 2082
ENST00000286627 KCNMA1-001 protein_coding Homo_sapiens 0 2266
ENST00000286628 KCNMA1-009 protein_coding Homo_sapiens 0 1629
ENST00000354353 KCNMA1-201 protein_coding Homo_sapiens 0 1533
ENST00000372403 KCNMA1-004 protein_coding Homo_sapiens 0 2266
ENST00000372408 KCNMA1-005 protein_coding Homo_sapiens 0 2266
ENST00000372421 KCNMA1-002 protein_coding Homo_sapiens 0 2266
ENST00000372437 KCNMA1-006 protein_coding Homo_sapiens 0 1629
ENST00000372440 KCNMA1-003 protein_coding Homo_sapiens 0 2266
ENST00000372443 KCNMA1-010 protein_coding Homo_sapiens 0 2935
ENST00000404771 KCNMA1-008 protein_coding Homo_sapiens 0 1629
ENST00000404857 KCNMA1-202 protein_coding Homo_sapiens 0 2137
ENST00000406533 KCNMA1-203 protein_coding Homo_sapiens 0 2771
ENST00000434208 KCNMA1-011 protein_coding Homo_sapiens 0 1062
ENST00000457953 KCNMA1-007 protein_coding Homo_sapiens 0 1629
ENST00000604624 KCNMA1-020 protein_coding Homo_sapiens 0 2137

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