C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000133872 cops2-002 ENSDARG00000004785 7955 - 25:33351106-33360283 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSDART00000133872
Transcript ID Brain Kidney
ENSDART00000133872 15.758±0.09 1.598±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QE CIL_0004QE_0001 CGP 25:33344712-33378850

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028635 Cops2-002 protein_coding Mus_musculus 0 725
ENSMUST00000110462 Cops2-003 protein_coding Mus_musculus 0 459
ENSMUST00000110463 Cops2-001 protein_coding Mus_musculus 0 688
ENSMUST00000139343 Cops2-004 processed_transcript Mus_musculus 0 357
ENSMUST00000152683 Cops2-005 processed_transcript Mus_musculus 2e-16 90
ENST00000299259 COPS2-003 protein_coding Homo_sapiens 0 651
ENST00000388901 COPS2-001 protein_coding Homo_sapiens 0 686
ENST00000542928 COPS2-002 protein_coding Homo_sapiens 0.00000000000004 84
ENST00000558545 COPS2-004 retained_intron Homo_sapiens 0 359
ENST00000558843 COPS2-006 protein_coding Homo_sapiens 0 652
ENST00000561248 COPS2-005 protein_coding Homo_sapiens 0.00000000000001 84

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