C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COP9 signalosome subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542928 COPS2-002 ENSG00000166200 9606 - 15:49127536-49155604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000542928
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000542928 9.600±0.00 9.344±0.00 11.109±0.00 13.403±0.00 23.688±0.00 8.226±0.00 12.553±0.00 11.701±0.00 9.469±0.00 4.335±0.00 16.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PL CIL_0002PL_0001 CGP 15:48988476-49155661
CIL_0004QE CIL_0004QE_0002 CGP 15:49106068-49367869

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028635 Cops2-002 protein_coding Mus_musculus 0 2242
ENSMUST00000110463 Cops2-001 protein_coding Mus_musculus 0 2145
ENSMUST00000110462 Cops2-003 protein_coding Mus_musculus 0 1526
ENSMUST00000139343 Cops2-004 processed_transcript Mus_musculus 0 193
ENSMUST00000152683 Cops2-005 processed_transcript Mus_musculus 2e-26 124
ENSDART00000133872 cops2-002 protein_coding Danio_rerio 0.00000000000004 84
ENSDART00000006124 cops2-001 protein_coding Danio_rerio 0.00000000000004 84

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