C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139343 Cops2-004 ENSMUSG00000027206 10090 - 2:125842722-125858996 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000139343
Transcript ID Testis
ENSMUST00000139343 32.621±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PL CIL_0002PL_0002 CGP 2:125736986-125859139
CIL_0004QE CIL_0004QE_0003 CGP 2:125830304-125984299

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133872 cops2-002 protein_coding Danio_rerio 0 357
ENSDART00000006124 cops2-001 protein_coding Danio_rerio 0 351
ENST00000299259 COPS2-003 protein_coding Homo_sapiens 0 568
ENST00000388901 COPS2-001 protein_coding Homo_sapiens 0 568
ENST00000542928 COPS2-002 protein_coding Homo_sapiens 0 193
ENST00000558545 COPS2-004 retained_intron Homo_sapiens 0 571
ENST00000558843 COPS2-006 protein_coding Homo_sapiens 0 568
ENST00000561248 COPS2-005 protein_coding Homo_sapiens 0 193

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