Transcript ID | Heart | Ovary |
---|---|---|
ENST00000356948 | 0.238±0.00 | 14.379±0.00 |
Transcript Info |
||||||
Description: | polypyrimidine tract binding protein 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000356948 | PTBP1-001 | ENSG00000011304 | 9606 | + | 19:797075-812327 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0008XG | CIL_0008XG_0001 | VISTA | 19:477571-1083531 |
CIL_00051Q | CIL_00051Q_0001 | CGP | 19:751126-812327 |
CIL_00008B | CIL_00008B_0001 | CGP | 19:797075-821977 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000166 | IEA | nucleotide binding |
GO:0000381 | IDA | regulation of alternative mRNA splicing, via spliceosome |
GO:0000398 | TAS | mRNA splicing, via spliceosome |
GO:0003676 | IEA | nucleic acid binding |
GO:0003723 | TAS:IEA | RNA binding |
GO:0005515 | IPI | protein binding |
GO:0005634 | IEA | nucleus |
GO:0005654 | TAS | nucleoplasm |
GO:0005730 | TAS | nucleolus |
GO:0006397 | TAS:IEA | mRNA processing |
GO:0008187 | TAS | poly-pyrimidine tract binding |
GO:0008380 | TAS | RNA splicing |
GO:0010467 | TAS | gene expression |
GO:0016020 | IDA | membrane |
GO:0033119 | IDA | negative regulation of RNA splicing |
GO:0036002 | IDA | pre-mRNA binding |
GO:0044822 | IDA | poly(A) RNA binding |
GO:0048025 | IDA | negative regulation of mRNA splicing, via spliceosome |
GO:0051148 | IDA | negative regulation of muscle cell differentiation |
GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000172282 | Ptbp1-001 | protein_coding | Mus_musculus | 0 | 2202 |
ENSMUST00000165153 | Ptbp1-004 | retained_intron | Mus_musculus | 0 | 1347 |
ENSMUST00000165704 | Ptbp1-002 | protein_coding | Mus_musculus | 0 | 1116 |
ENSMUST00000057343 | Ptbp1-008 | nonsense_mediated_decay | Mus_musculus | 0 | 1074 |
ENSMUST00000095457 | Ptbp1-005 | protein_coding | Mus_musculus | 0 | 898 |
ENSMUST00000171216 | Ptbp1-016 | retained_intron | Mus_musculus | 0 | 863 |
ENSMUST00000169580 | Ptbp1-006 | retained_intron | Mus_musculus | 0 | 758 |
ENSMUST00000168988 | Ptbp1-013 | retained_intron | Mus_musculus | 0 | 691 |
ENSMUST00000099958 | Ptbp1-009 | processed_transcript | Mus_musculus | 0 | 608 |
ENSMUST00000164385 | Ptbp1-018 | retained_intron | Mus_musculus | 0 | 514 |
ENSMUST00000165724 | Ptbp1-017 | nonsense_mediated_decay | Mus_musculus | 0 | 479 |
ENSDART00000040308 | ptbp3-201 | protein_coding | Danio_rerio | 0 | 303 |
ENSDART00000146727 | ptbp3-001 | protein_coding | Danio_rerio | 0 | 303 |
ENSMUST00000169091 | Ptbp1-015 | protein_coding | Mus_musculus | 0 | 294 |
ENSMUST00000169483 | Ptbp1-012 | nonsense_mediated_decay | Mus_musculus | 0 | 248 |