C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | polypyrimidine tract binding protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000587136  |
PTBP1-008 |
ENSG00000011304 |
9606 | + |
19:804858-806660  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008XG | CIL_0008XG_0001 | VISTA | 19:477571-1083531 |
| CIL_00051Q | CIL_00051Q_0001 | CGP | 19:751126-812327 |
| CIL_00008B | CIL_00008B_0001 | CGP | 19:797075-821977 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000057343
|
Ptbp1-008 | nonsense_mediated_decay | Mus_musculus | 0 | 294 |
|
ENSMUST00000095457
|
Ptbp1-005 | protein_coding | Mus_musculus | 0 | 292 |
|
ENSMUST00000165704
|
Ptbp1-002 | protein_coding | Mus_musculus | 0 | 292 |
|
ENSMUST00000165724
|
Ptbp1-017 | nonsense_mediated_decay | Mus_musculus | 0 | 211 |
|
ENSMUST00000171216
|
Ptbp1-016 | retained_intron | Mus_musculus | 0 | 211 |
|
ENSMUST00000165153
|
Ptbp1-004 | retained_intron | Mus_musculus | 0 | 211 |
|
ENSMUST00000172282
|
Ptbp1-001 | protein_coding | Mus_musculus | 0 | 211 |
|
ENSDART00000040308
|
ptbp3-201 | protein_coding | Danio_rerio | 0.0000000000006 | 79 |
|
ENSDART00000146727
|
ptbp3-001 | protein_coding | Danio_rerio | 0.0000000000006 | 79 |
