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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | polypyrimidine tract binding protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000585956  |
PTBP1-016 |
ENSG00000011304 |
9606 | + |
19:804623-808646  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008XG | CIL_0008XG_0001 | VISTA | 19:477571-1083531 |
| CIL_00051Q | CIL_00051Q_0001 | CGP | 19:751126-812327 |
| CIL_00008B | CIL_00008B_0001 | CGP | 19:797075-821977 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000172282
|
Ptbp1-001 | protein_coding | Mus_musculus | 0 | 634 |
|
ENSMUST00000165724
|
Ptbp1-017 | nonsense_mediated_decay | Mus_musculus | 0 | 614 |
|
ENSMUST00000165153
|
Ptbp1-004 | retained_intron | Mus_musculus | 0 | 534 |
|
ENSMUST00000171216
|
Ptbp1-016 | retained_intron | Mus_musculus | 0 | 464 |
|
ENSMUST00000095457
|
Ptbp1-005 | protein_coding | Mus_musculus | 0 | 459 |
|
ENSMUST00000057343
|
Ptbp1-008 | nonsense_mediated_decay | Mus_musculus | 0 | 459 |
|
ENSMUST00000165704
|
Ptbp1-002 | protein_coding | Mus_musculus | 0 | 459 |
|
ENSDART00000040308
|
ptbp3-201 | protein_coding | Danio_rerio | 0 | 250 |
|
ENSDART00000146727
|
ptbp3-001 | protein_coding | Danio_rerio | 0 | 250 |
|
ENSMUST00000169580
|
Ptbp1-006 | retained_intron | Mus_musculus | 0 | 220 |
|
ENSMUST00000164385
|
Ptbp1-018 | retained_intron | Mus_musculus | 0 | 220 |
