C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15593
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122085 Gm15593-001 ENSMUSG00000084203 10090 + 6:18144734-18145741 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000122085
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000122085 0.047±0.02 0.008±0.00 0.021±0.00 0.125±0.03 0.063±0.00 0.052±0.03 0.044±0.01 0.063±0.00 0.130±0.00 0.138±0.01 0.005±0.00 0.120±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063R CIL_00063R_0003 CGP 6:18050964-18322768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063800 gapdh-001 protein_coding Danio_rerio 0 531
ENSDART00000139939 gapdh-004 protein_coding Danio_rerio 0 409
ENSDART00000147739 gapdh-002 protein_coding Danio_rerio 0 387
ENSDART00000148397 gapdh-005 retained_intron Danio_rerio 0 289
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 983
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 763
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 966
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 983
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 983
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 697
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 813
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 728
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 313
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 544
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 688
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 664
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 861
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 771
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 564
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 488
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 590
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 671
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 521
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 501
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 499
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 412
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 669
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 907
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 446
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 763
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 763
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 470
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 715
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 726
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 785
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 595
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 222
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 344
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 802
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 758
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 497
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 673
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 601
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 601
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 401
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 898

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