C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10566
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086739 Gm10566-001 ENSMUSG00000073737 10090 - 1:15268802-15269797 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086739
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086739 0.140±0.10 0.047±0.00 2.339±0.23 2.952±0.68 0.159±0.08 0.105±0.04 0.143±0.09 0.095±0.06 0.942±1.63 0.045±0.01 0.203±0.10 0.162±0.09 0.095±0.02 0.287±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BY CIL_0005BY_0003 CGP 1:14872648-15723750

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063800 gapdh-001 protein_coding Danio_rerio 0 656
ENSDART00000139939 gapdh-004 protein_coding Danio_rerio 0 477
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 455
ENSDART00000147739 gapdh-002 protein_coding Danio_rerio 0 427
ENSDART00000148397 gapdh-005 retained_intron Danio_rerio 0 302
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1195
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 929
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1173
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1195
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1195
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 545
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 959
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 911
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1000
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 887
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 322
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 612
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 894
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 835
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1092
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 913
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 732
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 654
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 893
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 604
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 750
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 826
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 654
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 669
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 645
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 4e-32 139
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 547
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 821
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1127
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 837
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 623
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 929
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 929
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 630
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 833
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 894
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 900
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 961
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 686
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 294
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 281
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 893
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 931
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 1000
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 604
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 857
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 752
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 752
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 588
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1055

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