C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 4908
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121923 Gm4908-001 ENSMUSG00000083094 10090 + X:47471808-47472812 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000121923
Transcript ID Testis
ENSMUST00000121923 0.059±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000W CIL_00000W_0002 CGP X:46329007-47892974

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063800 gapdh-001 protein_coding Danio_rerio 0 412
ENSDART00000139939 gapdh-004 protein_coding Danio_rerio 0 303
ENSDART00000147739 gapdh-002 protein_coding Danio_rerio 0 281
ENSDART00000148397 gapdh-005 retained_intron Danio_rerio 0 222
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 929
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 209
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 915
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 929
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 929
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 680
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 837
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 719
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 702
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 503
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 691
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 209
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 209
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 209
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 636
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 691
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 750
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 254
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 756
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 551

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