C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5710
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183020 Gm5710-001 ENSMUSG00000098042 10090 - 3:121180103-121181097 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungMuscleTestisENSMUST00000183020
Transcript ID Bladder Brain Breast Liver Lung Muscle Testis
ENSMUST00000183020 0.008±0.00 0.008±0.00 0.079±0.04 0.019±0.01 0.039±0.00 0.067±0.00 0.044±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063800 gapdh-001 protein_coding Danio_rerio 0 486
ENSDART00000139939 gapdh-004 protein_coding Danio_rerio 0 359
ENSDART00000147739 gapdh-002 protein_coding Danio_rerio 0 331
ENSDART00000148397 gapdh-005 retained_intron Danio_rerio 0 259
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 929
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 719
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 928
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 929
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 929
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 424
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 649
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 760
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 667
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 305
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 449
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 649
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 651
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 815
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 676
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 616
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 435
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 638
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 568
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 529
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 5e-26 119
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 385
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 628
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 436
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 719
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 719
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 483
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 638
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 682
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 686
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 769
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 545
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 357
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 739
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 708
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 547
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 658
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 448
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 839

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