C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding protein, fox-1 homolog (C. elegans) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000150888 rbfox1-005 ENSDARG00000014746 7955 - 3:28137124-28199594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSDART00000150888
Transcript ID Liver
ENSDART00000150888 0.062±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056416 Rbfox1-201 protein_coding Mus_musculus 0 270
ENSMUST00000115841 Rbfox1-202 protein_coding Mus_musculus 0 268
ENST00000311745 RBFOX1-001 protein_coding Homo_sapiens 0 429
ENST00000340209 RBFOX1-201 protein_coding Homo_sapiens 0 429
ENST00000355637 RBFOX1-002 protein_coding Homo_sapiens 0 451
ENST00000422070 RBFOX1-009 protein_coding Homo_sapiens 0 429
ENST00000436368 RBFOX1-011 protein_coding Homo_sapiens 0 429
ENST00000535565 RBFOX1-005 protein_coding Homo_sapiens 0 385
ENST00000547338 RBFOX1-008 protein_coding Homo_sapiens 0 429
ENST00000547372 RBFOX1-010 protein_coding Homo_sapiens 0 429
ENST00000547605 RBFOX1-014 protein_coding Homo_sapiens 0 429
ENST00000550418 RBFOX1-003 protein_coding Homo_sapiens 0 429
ENST00000551752 RBFOX1-007 protein_coding Homo_sapiens 0 429
ENST00000552089 RBFOX1-006 protein_coding Homo_sapiens 0 544
ENST00000553186 RBFOX1-004 protein_coding Homo_sapiens 0 616
ENST00000567470 RBFOX1-018 protein_coding Homo_sapiens 0 276
ENST00000570188 RBFOX1-016 retained_intron Homo_sapiens 0 276
ENST00000570626 RBFOX1-019 protein_coding Homo_sapiens 0 283
ENST00000620507 RBFOX1-202 protein_coding Homo_sapiens 0 616

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