C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding protein, fox-1 homolog (C. elegans) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567470 RBFOX1-018 ENSG00000078328 9606 + 16:7653866-7710819 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000567470
Transcript ID Placenta
ENST00000567470 0.442±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EQ CIL_0000EQ_0001 CGP 16:5084304-7713338
CIL_000882 CIL_000882_0001 VISTA 16:5441186-6042172
CIL_0000EP CIL_0000EP_0001 CGP 16:6019094-8590193

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056416 Rbfox1-201 protein_coding Mus_musculus 0 466
ENSMUST00000115841 Rbfox1-202 protein_coding Mus_musculus 0 444
ENSDART00000122037 rbfox1-001 protein_coding Danio_rerio 0 329
ENSDART00000150888 rbfox1-005 protein_coding Danio_rerio 0 276

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