| Transcript ID | Breast | Heart | Muscle | Placenta |
|---|---|---|---|---|
| ENST00000340209 | 0.071±0.00 | 1.338±0.12 | 9.257±8.05 | 0.091±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RNA binding protein, fox-1 homolog (C. elegans) 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000340209  |
RBFOX1-201 |
ENSG00000078328 |
9606 | + |
16:7332750-7713338  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000EQ | CIL_0000EQ_0001 | CGP | 16:5084304-7713338 |
| CIL_000882 | CIL_000882_0001 | VISTA | 16:5441186-6042172 |
| CIL_0000EP | CIL_0000EP_0001 | CGP | 16:6019094-8590193 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003723 | IEA | RNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006397 | IEA | mRNA processing |
| GO:0008380 | IEA | RNA splicing |
| GO:0043484 | IEA | regulation of RNA splicing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000056416
|
Rbfox1-201 | protein_coding | Mus_musculus | 0 | 1759 |
|
ENSMUST00000115841
|
Rbfox1-202 | protein_coding | Mus_musculus | 0 | 1644 |
|
ENSDART00000122037
|
rbfox1-001 | protein_coding | Danio_rerio | 0 | 551 |
|
ENSDART00000151143
|
rbfox1-003 | protein_coding | Danio_rerio | 0 | 547 |
|
ENSDART00000150888
|
rbfox1-005 | protein_coding | Danio_rerio | 0 | 429 |
|
ENSMUST00000111581
|
Rbfox2-202 | protein_coding | Mus_musculus | 0 | 311 |
|
ENSMUST00000166610
|
Rbfox2-203 | protein_coding | Mus_musculus | 0 | 311 |
|
ENSMUST00000171751
|
Rbfox2-204 | protein_coding | Mus_musculus | 0 | 311 |
|
ENSMUST00000048145
|
Rbfox2-201 | protein_coding | Mus_musculus | 0 | 311 |
|
ENSDART00000151546
|
rbfox1-006 | protein_coding | Danio_rerio | 0 | 270 |
|
ENSDART00000055534
|
rbfox1-002 | retained_intron | Danio_rerio | 0 | 219 |
