C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 7 (herpes virus-associated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000150953 usp7-001 ENSDARG00000073710 7955 + 3:27757624-27791942 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000150953
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000150953 9.351±6.09 6.527±1.49 7.250±1.40 0.677±0.00 3.359±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004221 IEA ubiquitin thiolesterase activity
GO:0005515 IEA protein binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160326 Usp7-003 nonsense_mediated_decay Mus_musculus 0 2193
ENSMUST00000160405 Usp7-001 protein_coding Mus_musculus 0 2418
ENSMUST00000161046 Usp7-002 protein_coding Mus_musculus 0 2531
ENSMUST00000162445 Usp7-004 processed_transcript Mus_musculus 0 2361
ENST00000344836 USP7-001 protein_coding Homo_sapiens 0 2392
ENST00000381886 USP7-004 protein_coding Homo_sapiens 0 2298
ENST00000505925 RP11-252I13.1-001 processed_pseudogene Homo_sapiens 0 1110
ENST00000563085 USP7-002 protein_coding Homo_sapiens 0 1997
ENST00000563961 USP7-006 nonsense_mediated_decay Homo_sapiens 0 2058
ENST00000565455 USP7-005 nonsense_mediated_decay Homo_sapiens 0 2228
ENST00000566131 USP7-015 retained_intron Homo_sapiens 0 191
ENST00000567692 USP7-021 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000569448 USP7-017 retained_intron Homo_sapiens 0 342

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