C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160326 Usp7-003 ENSMUSG00000022710 10090 - 16:8689600-8738420 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000160326
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000160326 3.007±0.94 2.352±0.88 7.798±1.18 30.767±9.42 2.704±0.00 2.739±0.56 1.645±0.20 2.320±0.00 12.887±9.83 4.124±0.58 15.869±12.52 20.927±13.79 29.256±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EV CIL_0000EV_0002 CGP 16:8658587-8792308
CIL_0000EN CIL_0000EN_0002 CGP 16:8689595-8858916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000150953 usp7-001 protein_coding Danio_rerio 0 2193
ENSDART00000024453 usp7-201 protein_coding Danio_rerio 0 2109
ENST00000344836 USP7-001 protein_coding Homo_sapiens 0 4745
ENST00000381886 USP7-004 protein_coding Homo_sapiens 0 4318
ENST00000505925 RP11-252I13.1-001 processed_pseudogene Homo_sapiens 0 2196
ENST00000542333 USP7-003 nonsense_mediated_decay Homo_sapiens 0 1618
ENST00000562051 USP7-016 retained_intron Homo_sapiens 0 233
ENST00000562615 USP7-018 retained_intron Homo_sapiens 0 353
ENST00000563043 USP7-022 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000563085 USP7-002 protein_coding Homo_sapiens 0 3694
ENST00000563961 USP7-006 nonsense_mediated_decay Homo_sapiens 0 5304
ENST00000564117 USP7-011 protein_coding Homo_sapiens 0 259
ENST00000565455 USP7-005 nonsense_mediated_decay Homo_sapiens 0 4122
ENST00000565883 USP7-019 retained_intron Homo_sapiens 0 501
ENST00000566004 USP7-010 protein_coding Homo_sapiens 0 261
ENST00000566131 USP7-015 retained_intron Homo_sapiens 0 335
ENST00000566224 USP7-012 processed_transcript Homo_sapiens 4e-34 148
ENST00000566273 USP7-009 protein_coding Homo_sapiens 0 261
ENST00000567113 USP7-020 retained_intron Homo_sapiens 0 396
ENST00000567329 USP7-013 retained_intron Homo_sapiens 0 457
ENST00000567692 USP7-021 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000569230 USP7-008 protein_coding Homo_sapiens 0 257
ENST00000569448 USP7-017 retained_intron Homo_sapiens 0 562
ENST00000570256 USP7-014 retained_intron Homo_sapiens 0 640

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