C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160405 Usp7-001 ENSMUSG00000022710 10090 - 16:8689595-8792308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000160405
Transcript ID Adipose Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000160405 5.550±1.87 7.647±1.35 6.668±0.00 3.476±1.21 7.258±3.41 2.583±0.00 7.212±0.67 13.975±6.95 10.599±2.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EV CIL_0000EV_0002 CGP 16:8658587-8792308
CIL_0000EN CIL_0000EN_0002 CGP 16:8689595-8858916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008234 IEA cysteine-type peptidase activity
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000150953 usp7-001 protein_coding Danio_rerio 0 2418
ENSDART00000024453 usp7-201 protein_coding Danio_rerio 0 2335
ENST00000344836 USP7-001 protein_coding Homo_sapiens 0 5252
ENST00000381886 USP7-004 protein_coding Homo_sapiens 0 4824
ENST00000505925 RP11-252I13.1-001 processed_pseudogene Homo_sapiens 0 2518
ENST00000542333 USP7-003 nonsense_mediated_decay Homo_sapiens 0 2122
ENST00000562051 USP7-016 retained_intron Homo_sapiens 0 233
ENST00000562615 USP7-018 retained_intron Homo_sapiens 0 353
ENST00000563043 USP7-022 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000563085 USP7-002 protein_coding Homo_sapiens 0 4058
ENST00000563961 USP7-006 nonsense_mediated_decay Homo_sapiens 0 4745
ENST00000564117 USP7-011 protein_coding Homo_sapiens 0 627
ENST00000565455 USP7-005 nonsense_mediated_decay Homo_sapiens 0 4486
ENST00000565883 USP7-019 retained_intron Homo_sapiens 0 501
ENST00000566004 USP7-010 protein_coding Homo_sapiens 0 717
ENST00000566131 USP7-015 retained_intron Homo_sapiens 0 335
ENST00000566224 USP7-012 processed_transcript Homo_sapiens 0 200
ENST00000566273 USP7-009 protein_coding Homo_sapiens 0 647
ENST00000567113 USP7-020 retained_intron Homo_sapiens 0 396
ENST00000567329 USP7-013 retained_intron Homo_sapiens 0 457
ENST00000567692 USP7-021 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000569230 USP7-008 protein_coding Homo_sapiens 0 658
ENST00000569448 USP7-017 retained_intron Homo_sapiens 0 562
ENST00000570256 USP7-014 retained_intron Homo_sapiens 0 640

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