C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 4A (RBP1-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000151847 arid4a-003 ENSDARG00000043873 7955 - 17:11241382-11281965 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000151847
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000151847 4.815±2.09 2.773±0.67 2.625±0.00 0.922±0.00 2.194±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014421 Ankrd17-201 protein_coding Mus_musculus 0.000004 60
ENSMUST00000046305 Arid4a-001 protein_coding Mus_musculus 3e-24 119
ENSMUST00000081914 Ankrd17-202 protein_coding Mus_musculus 0.000004 60
ENSMUST00000168058 Ankrd17-203 protein_coding Mus_musculus 0.000002 60
ENST00000264183 ARID4B-201 protein_coding Homo_sapiens 1.99993e-41 176
ENST00000348476 ARID4A-201 protein_coding Homo_sapiens 4e-24 119
ENST00000349213 ARID4B-001 protein_coding Homo_sapiens 1.99993e-41 176
ENST00000355431 ARID4A-001 protein_coding Homo_sapiens 4e-24 119
ENST00000366603 ARID4B-004 protein_coding Homo_sapiens 1.99993e-41 176
ENST00000418304 ARID4B-007 protein_coding Homo_sapiens 6.00036e-42 176
ENST00000421364 ARID4B-010 nonsense_mediated_decay Homo_sapiens 1.99993e-41 176
ENST00000431317 ARID4A-002 protein_coding Homo_sapiens 4e-24 119
ENST00000466653 ARID4B-002 retained_intron Homo_sapiens 9.00054e-42 176
ENST00000491632 ARID4B-005 retained_intron Homo_sapiens 9.99967e-42 176

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