C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kalirin, RhoGEF kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142817 Kalrn-009 ENSMUSG00000061751 10090 - 16:34013137-34392109 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLungMuscleOvaryPlacentaENSMUST00000142817
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENSMUST00000142817 0.652±0.00 0.476±0.00 1.003±0.00 0.193±0.01 0.700±0.07 0.554±0.17 0.415±0.10 0.939±0.20 0.517±0.06 1.395±0.50 0.632±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HE CIL_0008HE_0002 VISTA 16:33792411-34395018

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000000382 triob-201 protein_coding Danio_rerio 0 206
ENSDART00000153785 triob-001 protein_coding Danio_rerio 0 206
ENST00000240874 KALRN-005 protein_coding Homo_sapiens 0 6451
ENST00000291478 KALRN-001 protein_coding Homo_sapiens 0 2638
ENST00000344204 TRIO-001 protein_coding Homo_sapiens 0 1437
ENST00000354186 KALRN-004 protein_coding Homo_sapiens 0 9485
ENST00000360013 KALRN-201 protein_coding Homo_sapiens 0 9372
ENST00000393496 KALRN-002 protein_coding Homo_sapiens 0 2013
ENST00000393501 KALRN-008 retained_intron Homo_sapiens 0 2712
ENST00000439170 KALRN-009 protein_coding Homo_sapiens 0 859
ENST00000448253 KALRN-010 protein_coding Homo_sapiens 0 950
ENST00000454902 KALRN-003 protein_coding Homo_sapiens 0 490
ENST00000459915 KALRN-014 protein_coding Homo_sapiens 0 2143
ENST00000460856 KALRN-013 protein_coding Homo_sapiens 0 6565
ENST00000471431 KALRN-017 retained_intron Homo_sapiens 0 505
ENST00000473056 KALRN-018 retained_intron Homo_sapiens 0 501
ENST00000484224 KALRN-020 retained_intron Homo_sapiens 0 538
ENST00000494648 KALRN-019 retained_intron Homo_sapiens 0 595
ENST00000498499 KALRN-021 retained_intron Homo_sapiens 0 1031
ENST00000509967 TRIO-008 protein_coding Homo_sapiens 0 1199
ENST00000512070 TRIO-010 nonsense_mediated_decay Homo_sapiens 0 1437
ENST00000513206 TRIO-002 protein_coding Homo_sapiens 0 1437
ENST00000515144 TRIO-003 retained_intron Homo_sapiens 0 1437
ENST00000522553 KALRN-011 retained_intron Homo_sapiens 0 809

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