C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060994 Rpl31-ps13-001 ENSMUSG00000051723 10090 + 13:100415565-100415942 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverMuscleOvaryPlacentaENSMUST00000060994
Transcript ID Adipose Bladder Brain Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000060994 0.212±0.00 3.872±3.64 1.511±1.20 1.617±0.65 0.159±0.01 3.509±4.74 0.174±0.05 0.218±0.08 0.259±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZF CIL_0004ZF_0002 CGP 13:100407770-100492579

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075402 rpl31-201 protein_coding Danio_rerio 0 252
ENSDART00000149851 rpl31-002 protein_coding Danio_rerio 0 252
ENSDART00000149554 rpl31-001 protein_coding Danio_rerio 0 252
ENSDART00000148688 rpl31-003 retained_intron Danio_rerio 0 230
ENSDART00000148984 rpl31-004 retained_intron Danio_rerio 4e-23 111
ENST00000264258 RPL31-001 protein_coding Homo_sapiens 0 483
ENST00000409000 RPL31-006 protein_coding Homo_sapiens 0 339
ENST00000409028 RPL31-007 protein_coding Homo_sapiens 0 429
ENST00000409038 RPL31-008 protein_coding Homo_sapiens 0 431
ENST00000409320 RPL31-002 protein_coding Homo_sapiens 0 429
ENST00000409650 RPL31-009 protein_coding Homo_sapiens 0 433
ENST00000409711 RPL31-004 protein_coding Homo_sapiens 0 339
ENST00000409733 RPL31-010 protein_coding Homo_sapiens 0 483
ENST00000419276 RPL31-003 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000431088 AC016712.2-001 processed_pseudogene Homo_sapiens 0 433
ENST00000441435 RPL31-011 protein_coding Homo_sapiens 0 372
ENST00000456292 RPL31-005 protein_coding Homo_sapiens 0 429
ENST00000480540 RP11-112J1.1-001 processed_pseudogene Homo_sapiens 0 425

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