C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431088 AC016712.2-001 ENSG00000235225 9606 + 2:222726457-222726834 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000431088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000431088 0.042±0.00 0.222±0.00 0.362±0.00 0.047±0.00 0.090±0.00 0.126±0.00 0.084±0.00 0.457±0.00 0.244±0.00 0.256±0.00 1.778±1.54 0.295±0.17 0.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XK CIL_0006XK_0001 CGP 2:222671738-222944639

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 460
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 460
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 460
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000181130 Rpl31-ps16-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000116034 Rpl31-ps10-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000119957 Rpl31-ps12-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000143596 Rpl31-ps14-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000060994 Rpl31-ps13-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000097040 Rpl31-ps17-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000080982 Rpl31-ps20-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000085128 Rpl31-ps1-201 processed_pseudogene Mus_musculus 0 411
ENSMUST00000079114 Rpl31-ps4-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000180885 Rpl31-ps18-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000180929 Rp31-ps19-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000118086 Rpl31-ps5-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000181182 Rpl31-ps21-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000119959 Rpl31-ps6-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000117961 Rpl31-ps22-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000191416 RP23-416O18.2-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000181557 Rpl31-ps25-001 processed_pseudogene Mus_musculus 0 287

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