C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396270 KRT8P39-001 ENSG00000233560 9606 + 12:68705634-68707066 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396270 0.085±0.00 0.478±0.00 0.235±0.00 0.121±0.03 0.913±0.00 0.191±0.10 0.053±0.00 0.072±0.00 0.141±0.00 0.126±0.02 0.031±0.00 0.330±0.28 0.081±0.00 0.430±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1146
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 363
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 363
ENSDART00000065351 krt4-201 protein_coding Danio_rerio 0 311
ENSDART00000012644 krt4-001 protein_coding Danio_rerio 0 311
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 283
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 244
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 239
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 222
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 1e-38 165
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 7e-36 156
ENSMUST00000071104 Krt72-001 protein_coding Mus_musculus 4e-33 147
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 2e-31 141
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 2e-31 141
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 9e-30 135
ENSMUST00000023710 Krt71-001 protein_coding Mus_musculus 4e-28 130
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 5e-27 126

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