C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FIP1 like 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080164 Fip1l1-001 ENSMUSG00000029227 10090 + 5:74535449-74598790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080164 3.664±0.47 2.747±0.97 6.029±0.16 10.895±4.42 2.778±0.66 3.692±0.73 2.302±0.37 3.360±0.47 3.892±1.42 4.353±1.30 1.465±0.59 4.893±2.66 3.444±0.65 1.392±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082M CIL_00082M_0002 VISTA 5:73965657-74568205
CIL_0008RT CIL_0008RT_0002 VISTA 5:74061294-74663523
CIL_0007V9 CIL_0007V9_0002 VISTA 5:74131979-74735797
CIL_0001CS CIL_0001CS_0002 CGP 5:74204816-74598790
CIL_0001CL CIL_0001CL_0002 CGP 5:74535449-74702911

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005847 IDA mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 IC mRNA polyadenylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306888 LNX1-002 protein_coding Homo_sapiens 0 377
ENST00000306932 FIP1L1-003 protein_coding Homo_sapiens 0 1818
ENST00000337488 FIP1L1-001 protein_coding Homo_sapiens 0 1016
ENST00000358575 FIP1L1-002 protein_coding Homo_sapiens 0 1192
ENST00000504094 FIP1L1-010 protein_coding Homo_sapiens 0 1014
ENST00000505125 FIP1L1-004 retained_intron Homo_sapiens 0 970
ENST00000507166 FIP1L1-005 protein_coding Homo_sapiens 0 907
ENST00000507206 FIP1L1-013 retained_intron Homo_sapiens 0 283
ENST00000507922 FIP1L1-009 protein_coding Homo_sapiens 0 717
ENST00000510668 FIP1L1-015 processed_transcript Homo_sapiens 0 412
ENST00000511055 FIP1L1-014 retained_intron Homo_sapiens 0 342
ENST00000511376 FIP1L1-012 processed_transcript Homo_sapiens 0 555
ENST00000513008 FIP1L1-008 retained_intron Homo_sapiens 0 972
ENST00000513975 FIP1L1-006 retained_intron Homo_sapiens 0 900
ENST00000514543 FIP1L1-011 nonsense_mediated_decay Homo_sapiens 0 1605

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