C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6498
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081029 Gm6498-001 ENSMUSG00000063885 10090 + 14:48198716-48228413 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081029
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081029 0.167±0.14 0.134±0.02 0.062±0.03 0.147±0.06 0.235±0.09 0.081±0.05 0.213±0.16 0.037±0.02 0.133±0.05 0.094±0.00 0.166±0.07 0.033±0.01 0.142±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000604 CIL_000604_0003 CGP 14:47648448-48260883
CIL_000601 CIL_000601_0003 CGP 14:48120869-48515135

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 965
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 843
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 965
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 965
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 965
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 730
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 725
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 649
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 654
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 839
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 760
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 532
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 654
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 442
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 547
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 590
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 464
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 499
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 608
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 872
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 527
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 843
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 843
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 643
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 429
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 608
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 604
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 604
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 965

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