C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 7808
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082002 Gm7808-201 ENSMUSG00000091460 10090 - 9:19927896-19928282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000082002
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000082002 0.809±0.58 0.687±0.00 0.375±0.05 2.027±0.00 0.439±0.26 0.343±0.13 0.615±0.34 0.330±0.27 0.350±0.20 0.227±0.06 0.673±0.36 1.030±0.85 0.260±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000035235 UBC-001 protein_coding Danio_rerio 0 287
ENSDART00000123908 UBC-201 protein_coding Danio_rerio 0 276
ENSDART00000097583 ubb-001 protein_coding Danio_rerio 0 265
ENSDART00000099105 ubc-001 protein_coding Danio_rerio 0 261
ENST00000339647 UBC-001 protein_coding Homo_sapiens 0 298
ENST00000408928 AC099535.4-001 processed_pseudogene Homo_sapiens 0 392
ENST00000535131 UBC-015 protein_coding Homo_sapiens 0 298
ENST00000535859 UBC-013 protein_coding Homo_sapiens 0 298
ENST00000536661 UBC-010 processed_transcript Homo_sapiens 0 239
ENST00000536769 UBC-007 protein_coding Homo_sapiens 0 298
ENST00000538617 UBC-003 protein_coding Homo_sapiens 0 298
ENST00000540351 UBC-009 protein_coding Homo_sapiens 0 298
ENST00000540700 UBC-011 protein_coding Homo_sapiens 0 298
ENST00000541272 UBC-016 protein_coding Homo_sapiens 0 298
ENST00000541645 UBC-014 protein_coding Homo_sapiens 0 298
ENST00000542416 UBC-008 protein_coding Homo_sapiens 0 248
ENST00000544481 UBC-017 processed_transcript Homo_sapiens 0 289
ENST00000546120 UBC-201 protein_coding Homo_sapiens 0 298
ENST00000546271 UBC-012 protein_coding Homo_sapiens 0 298

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