C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409403 CLK1-006 ENSG00000013441 9606 - 2:200853113-200864662 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungMuscleOvaryPlacentaTestisENST00000409403
Transcript ID Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000409403 4.487±0.00 12.630±0.00 1.733±0.00 28.502±0.00 10.253±0.00 11.335±0.00 5.152±0.00 16.959±2.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AX CIL_0002AX_0001 CGP 2:200810594-200864744
CIL_0002AY CIL_0002AY_0001 CGP 2:200853009-200889303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034868 Clk1-001 protein_coding Mus_musculus 0 1258
ENSMUST00000148330 Clk1-004 nonsense_mediated_decay Mus_musculus 0 771
ENSMUST00000156931 Clk1-002 retained_intron Mus_musculus 0 771
ENSMUST00000186552 Clk1-013 retained_intron Mus_musculus 0 754
ENSMUST00000093132 Clk4-001 protein_coding Mus_musculus 0 516
ENSMUST00000141570 Clk1-010 processed_transcript Mus_musculus 0 427
ENSMUST00000151338 Clk1-005 nonsense_mediated_decay Mus_musculus 0 418
ENSMUST00000123580 Clk1-006 retained_intron Mus_musculus 0 418
ENSMUST00000131051 Clk1-012 retained_intron Mus_musculus 0 361
ENSMUST00000129577 Clk1-003 retained_intron Mus_musculus 0 263
ENSMUST00000135380 Clk1-008 retained_intron Mus_musculus 0 263
ENSMUST00000129303 Clk1-009 processed_transcript Mus_musculus 0 220
ENSMUST00000130641 Clk4-005 protein_coding Mus_musculus 0 211
ENSMUST00000148467 Clk4-014 retained_intron Mus_musculus 3e-30 137

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