C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316308 CLK4-001 ENSG00000113240 9606 - 5:178602664-178627114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316308
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316308 1.092±0.00 4.068±0.00 2.226±0.00 3.048±0.00 4.021±0.00 1.326±0.00 4.147±0.00 1.875±0.60 3.328±0.00 2.412±0.00 3.506±1.27 1.028±0.55 4.085±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XD CIL_0000XD_0002 CGP 5:178237618-178630615

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004674 ISS protein serine/threonine kinase activity
GO:0004712 IEA protein serine/threonine/tyrosine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0043484 IMP regulation of RNA splicing
GO:0046777 IEA protein autophosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093132 Clk4-001 protein_coding Mus_musculus 0 2333
ENSMUST00000109111 Clk4-004 protein_coding Mus_musculus 0 1587
ENSMUST00000109113 Clk4-003 protein_coding Mus_musculus 0 1587
ENSMUST00000034868 Clk1-001 protein_coding Mus_musculus 0 758
ENSMUST00000148330 Clk1-004 nonsense_mediated_decay Mus_musculus 0 621
ENSMUST00000156931 Clk1-002 retained_intron Mus_musculus 0 621
ENSMUST00000136587 Clk4-009 retained_intron Mus_musculus 0 558
ENSMUST00000130641 Clk4-005 protein_coding Mus_musculus 0 532
ENSMUST00000148467 Clk4-014 retained_intron Mus_musculus 0 499
ENSMUST00000186552 Clk1-013 retained_intron Mus_musculus 0 433
ENSMUST00000140628 Clk4-012 retained_intron Mus_musculus 0 409
ENSMUST00000151338 Clk1-005 nonsense_mediated_decay Mus_musculus 0 403
ENSMUST00000123580 Clk1-006 retained_intron Mus_musculus 0 399
ENSMUST00000126131 Clk4-006 nonsense_mediated_decay Mus_musculus 0 313
ENSMUST00000133200 Clk4-010 retained_intron Mus_musculus 0 309
ENSMUST00000148053 Clk4-007 nonsense_mediated_decay Mus_musculus 0 302
ENSMUST00000146776 Clk4-008 retained_intron Mus_musculus 0 298
ENSMUST00000147007 Clk4-011 retained_intron Mus_musculus 0 294
ENSMUST00000143468 Clk4-013 retained_intron Mus_musculus 0 213
ENSMUST00000129303 Clk1-009 processed_transcript Mus_musculus 1.96182e-44 185
ENSMUST00000141570 Clk1-010 processed_transcript Mus_musculus 7.00649e-43 180
ENSMUST00000129577 Clk1-003 retained_intron Mus_musculus 4e-30 137
ENSMUST00000139787 Clk1-011 processed_transcript Mus_musculus 3e-26 124

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