C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5148
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099128 Gm5148-003 ENSMUSG00000058174 10090 - 3:37714326-37724490 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyMuscleOvaryPlacentaTestisENSMUST00000099128
Transcript ID Adipose Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENSMUST00000099128 0.243±0.00 0.204±0.10 0.186±0.00 0.028±0.00 0.619±0.03 0.146±0.02 7.118±0.78 5.101±1.73 0.097±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V2 CIL_0007V2_0002 VISTA 3:37371698-37974083
CIL_00099R CIL_00099R_0002 VISTA 3:37594700-38198826

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296674 RPS23-001 protein_coding Homo_sapiens 0 529
ENST00000429775 RPS23P8-001 processed_pseudogene Homo_sapiens 0 359
ENST00000466210 RPS23P7-001 processed_pseudogene Homo_sapiens 0 370
ENST00000503605 RPS23-003 processed_transcript Homo_sapiens 0 486
ENST00000504293 RPS23-004 retained_intron Homo_sapiens 0 497
ENST00000507980 RPS23-006 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000508814 ATG10-010 processed_transcript Homo_sapiens 9.94922e-44 180
ENST00000510210 RPS23-008 protein_coding Homo_sapiens 0 483
ENST00000512493 RPS23-007 protein_coding Homo_sapiens 0 484
ENST00000514253 ATG10-009 processed_transcript Homo_sapiens 7.00649e-44 182

Loading