C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6913
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100019 Gm6913-001 ENSMUSG00000075288 10090 + 14:60141063-60141410 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonLiverOvaryPlacentaENSMUST00000100019
Transcript ID Adipose Bladder Brain Colon Liver Ovary Placenta
ENSMUST00000100019 0.206±0.00 0.087±0.00 0.125±0.08 0.393±0.00 0.275±0.22 1.081±0.00 0.389±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055P CIL_00055P_0002 CGP 14:59625281-60197179

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310837 EIF1-003 processed_transcript Homo_sapiens 0 202
ENST00000421436 EIF1P1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000423841 EIF1P3-001 processed_pseudogene Homo_sapiens 0 414
ENST00000428233 EIF1P2-001 processed_pseudogene Homo_sapiens 0 244
ENST00000462917 EIF1-002 retained_intron Homo_sapiens 0 246
ENST00000469257 EIF1-001 protein_coding Homo_sapiens 0 496
ENST00000469308 EIF1-005 processed_transcript Homo_sapiens 0 438
ENST00000482111 EIF1-004 retained_intron Homo_sapiens 0 302
ENST00000487533 EIF1P7-001 processed_pseudogene Homo_sapiens 0 381
ENST00000585002 EIF1P5-001 unprocessed_pseudogene Homo_sapiens 0 193
ENST00000586699 EIF1-009 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000591776 EIF1-010 protein_coding Homo_sapiens 0 494

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