C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428233 EIF1P2-001 ENSG00000235549 9606 - 1:38958275-38958925 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyTestisENST00000428233
Transcript ID Brain Kidney Testis
ENST00000428233 0.068±0.00 0.168±0.00 0.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PZ CIL_0008PZ_0001 VISTA 1:38426937-39028462
CIL_0008G7 CIL_0008G7_0001 VISTA 1:38483085-39084457
CIL_0007Q3 CIL_0007Q3_0001 VISTA 1:38525828-39126769
CIL_000990 CIL_000990_0001 VISTA 1:38863737-39466035

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049385 Eif1-001 protein_coding Mus_musculus 0 313
ENSMUST00000139408 Gm10157-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000178971 Gm6900-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000139846 Eif1-003 processed_transcript Mus_musculus 0 279
ENSMUST00000173735 Gm6155-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000179168 Gm16378-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000072732 Gm5471-201 processed_pseudogene Mus_musculus 0 268
ENSMUST00000119926 Gm14686-001 transcribed_processed_pseudogene Mus_musculus 0 259
ENSMUST00000088313 Emd-002 protein_coding Mus_musculus 0 259
ENSMUST00000161062 Gm6428-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000100019 Gm6913-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000152521 Eif1-004 protein_coding Mus_musculus 0 196
ENSMUST00000151513 Eif1-002 protein_coding Mus_musculus 0 191

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