C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 1 pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487533 EIF1P7-001 ENSG00000213772 9606 - 2:9271292-9271628 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000487533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000487533 0.318±0.00 0.082±0.00 0.266±0.00 0.209±0.00 0.294±0.09 0.304±0.00 0.408±0.00 0.122±0.00 0.072±0.00 0.446±0.00 0.816±0.00 0.355±0.34 0.161±0.02 0.508±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AP CIL_0007AP_0002 CGP 2:8852690-9405683
CIL_0007AV CIL_0007AV_0002 CGP 2:9206765-9423547

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049385 Eif1-001 protein_coding Mus_musculus 0 472
ENSMUST00000178971 Gm6900-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000139408 Gm10157-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000179168 Gm16378-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000139846 Eif1-003 processed_transcript Mus_musculus 0 427
ENSMUST00000119926 Gm14686-001 transcribed_processed_pseudogene Mus_musculus 0 425
ENSMUST00000072732 Gm5471-201 processed_pseudogene Mus_musculus 0 425
ENSMUST00000088313 Emd-002 protein_coding Mus_musculus 0 425
ENSMUST00000076828 Gm5265-201 processed_pseudogene Mus_musculus 0 416
ENSMUST00000173735 Gm6155-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000084813 RP24-208N6.2-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000161062 Gm6428-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000121450 Eif1-ps3-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000086606 Eif1-ps1-201 processed_pseudogene Mus_musculus 0 394
ENSMUST00000100019 Gm6913-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000151513 Eif1-002 protein_coding Mus_musculus 0 322
ENSMUST00000159003 Gm16125-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000152521 Eif1-004 protein_coding Mus_musculus 0 313
ENSMUST00000132618 Eif1-005 processed_transcript Mus_musculus 0 189

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