C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2000
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102782 Gm2000-001 ENSMUSG00000078193 10090 + 1:156366040-156366484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102782
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102782 4.337±1.23 0.319±0.12 24.814±10.69 19.950±2.89 1.758±0.50 1.394±0.23 1.378±0.33 1.918±0.71 19.329±23.32 1.162±0.79 0.984±0.40 1.394±0.89 1.776±2.22 1.379±0.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348462 RPL35-001 protein_coding Homo_sapiens 0 475
ENST00000373570 RPL35-005 protein_coding Homo_sapiens 0 276
ENST00000402419 RPL35P2-001 processed_pseudogene Homo_sapiens 0 424
ENST00000403133 RPL35P3-001 processed_pseudogene Homo_sapiens 0 309
ENST00000433284 RPL35P8-001 processed_pseudogene Homo_sapiens 0 257
ENST00000433398 RPL35P5-001 processed_pseudogene Homo_sapiens 0 425
ENST00000450819 RPL35P1-001 processed_pseudogene Homo_sapiens 0 401
ENST00000487431 RPL35-004 retained_intron Homo_sapiens 0 470
ENST00000493018 RPL35-003 nonsense_mediated_decay Homo_sapiens 0 276

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