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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein L35 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000493018  |
RPL35-003 |
ENSG00000136942 |
9606 | - |
9:124857883-124861935  |
nonsense_mediated_decay |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00075G | CIL_00075G_0001 | CGP | 9:124777158-124857890 |
| CIL_00075H | CIL_00075H_0001 | CGP | 9:124853417-124861981 |
| CIL_00075E | CIL_00075E_0001 | CGP | 9:124857880-124877733 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003735 | IEA | structural constituent of ribosome |
| GO:0005622 | IEA | intracellular |
| GO:0005840 | IEA | ribosome |
| GO:0006412 | IEA | translation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000102782
|
Gm2000-001 | protein_coding | Mus_musculus | 0 | 276 |
|
ENSMUST00000080861
|
Rpl35-001 | protein_coding | Mus_musculus | 0 | 270 |
|
ENSMUST00000152441
|
Rpl35-003 | processed_transcript | Mus_musculus | 0 | 265 |
|
ENSMUST00000118982
|
Gm4342-001 | processed_pseudogene | Mus_musculus | 0 | 263 |
|
ENSMUST00000165229
|
Gm10269-201 | protein_coding | Mus_musculus | 0 | 257 |
|
ENSMUST00000117147
|
Gm12460-001 | processed_pseudogene | Mus_musculus | 0 | 204 |
|
ENSMUST00000092020
|
Gm8444-201 | protein_coding | Mus_musculus | 9.99995e-41 | 171 |
|
ENSMUST00000118070
|
Rpl35-ps1-001 | processed_pseudogene | Mus_musculus | 5e-39 | 165 |
|
ENSMUST00000120817
|
Gm7212-001 | processed_pseudogene | Mus_musculus | 1e-35 | 154 |
|
ENSMUST00000134694
|
Itgam-010 | protein_coding | Mus_musculus | 3e-32 | 143 |
|
ENSMUST00000098015
|
Itgam-001 | protein_coding | Mus_musculus | 3e-32 | 143 |
|
ENSMUST00000117995
|
Gm12225-001 | processed_pseudogene | Mus_musculus | 3e-26 | 122 |
|
ENSMUST00000039535
|
Wdr38-003 | nonsense_mediated_decay | Mus_musculus | 3e-26 | 122 |
|
ENSMUST00000165437
|
Gm5258-001 | processed_pseudogene | Mus_musculus | 0.00000000000002 | 84 |
