| Transcript ID | Colon |
|---|---|
| ENSMUST00000107132 | 4.564±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ataxin 7-like 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000107132  |
Atxn7l3-201 |
ENSMUSG00000059995 |
10090 | - |
11:102289301-102296629  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B6 | CIL_0009B6_0002 | VISTA | 11:102063033-102664797 |
| CIL_0003L7 | CIL_0003L7_0003 | CGP | 11:102284931-102296631 |
| CIL_0004D4 | CIL_0004D4_0003 | CGP | 11:102289300-102319742 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000124 | ISS | SAGA complex |
| GO:0003713 | ISS | transcription coactivator activity |
| GO:0005515 | IEA | protein binding |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016578 | IEA | histone deubiquitination |
| GO:0030374 | IEA | ligand-dependent nuclear receptor transcription coactivator activity |
| GO:0045893 | ISS | positive regulation of transcription, DNA-templated |
| GO:0071819 | IEA | DUBm complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000104118
|
atxn7l3-201 | protein_coding | Danio_rerio | 0 | 411 |
|
ENST00000311910
|
RP11-30M20.1-001 | processed_pseudogene | Homo_sapiens | 0 | 793 |
|
ENST00000389384
|
ATXN7L3-001 | protein_coding | Homo_sapiens | 0 | 2918 |
|
ENST00000454077
|
ATXN7L3-003 | protein_coding | Homo_sapiens | 0 | 2935 |
|
ENST00000519948
|
ATXN7L3B-001 | protein_coding | Homo_sapiens | 0 | 200 |
|
ENST00000587022
|
ATXN7L3-005 | retained_intron | Homo_sapiens | 0 | 276 |
|
ENST00000587097
|
ATXN7L3-002 | protein_coding | Homo_sapiens | 0 | 1768 |
|
ENST00000589607
|
ATXN7L3-007 | retained_intron | Homo_sapiens | 0 | 326 |
|
ENST00000589805
|
ATXN7L3-011 | protein_coding | Homo_sapiens | 0 | 765 |
|
ENST00000590169
|
ATXN7L3-004 | protein_coding | Homo_sapiens | 0 | 804 |
|
ENST00000590537
|
ATXN7L3-006 | protein_coding | Homo_sapiens | 0 | 475 |
|
ENST00000591295
|
ATXN7L3-009 | protein_coding | Homo_sapiens | 0 | 2036 |
|
ENST00000593073
|
ATXN7L3-012 | processed_transcript | Homo_sapiens | 0 | 684 |
