C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 7-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591295 ATXN7L3-009 ENSG00000087152 9606 - 17:44191805-44196053 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryPlacentaTestisENST00000591295
Transcript ID Adrenal Breast Colon Liver Lung Ovary Placenta Testis
ENST00000591295 7.169±0.00 2.141±0.00 3.180±0.00 3.067±0.00 5.719±0.00 8.271±0.00 7.170±0.76 4.460±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0003L7 CIL_0003L7_0002 CGP 17:44186970-44200113
CIL_0004D4 CIL_0004D4_0002 CGP 17:44191805-44221626

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107132 Atxn7l3-201 protein_coding Mus_musculus 0 2036
ENSMUST00000073234 Atxn7l3-001 protein_coding Mus_musculus 0 2036
ENSMUST00000107134 Atxn7l3-002 protein_coding Mus_musculus 0 2036
ENSMUST00000137387 Atxn7l3-003 protein_coding Mus_musculus 0 2036
ENSMUST00000141516 Atxn7l3-005 protein_coding Mus_musculus 0 2010
ENSMUST00000145484 Atxn7l3-004 retained_intron Mus_musculus 0 2010
ENSMUST00000099276 Atxn7l3b-001 protein_coding Mus_musculus 0.000000000000005 88

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