C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5148
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108105 Gm5148-002 ENSMUSG00000058174 10090 - 3:37714198-37724329 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonOvaryPlacentaENSMUST00000108105
Transcript ID Adrenal Bladder Breast Colon Ovary Placenta
ENSMUST00000108105 0.586±0.06 0.648±0.00 0.161±0.00 0.353±0.15 0.217±0.08 0.297±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V2 CIL_0007V2_0002 VISTA 3:37371698-37974083
CIL_00099R CIL_00099R_0002 VISTA 3:37594700-38198826

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296674 RPS23-001 protein_coding Homo_sapiens 0 529
ENST00000429775 RPS23P8-001 processed_pseudogene Homo_sapiens 0 359
ENST00000466210 RPS23P7-001 processed_pseudogene Homo_sapiens 0 370
ENST00000503605 RPS23-003 processed_transcript Homo_sapiens 0 486
ENST00000504293 RPS23-004 retained_intron Homo_sapiens 0 497
ENST00000507980 RPS23-006 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000508814 ATG10-010 processed_transcript Homo_sapiens 9.94922e-44 180
ENST00000510210 RPS23-008 protein_coding Homo_sapiens 0 483
ENST00000512493 RPS23-007 protein_coding Homo_sapiens 0 484
ENST00000514253 ATG10-009 processed_transcript Homo_sapiens 7.00649e-44 182

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