C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 3, skeletal muscle, embryonic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108689 Myh3-001 ENSMUSG00000020908 10090 + 11:67078300-67102286 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungOvaryPlacentaENSMUST00000108689
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000108689 0.002±0.00 0.000±0.00 0.259±0.02 0.002±0.00 0.001±0.00 1.454±2.00 0.028±0.04 0.006±0.00 0.128±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IEA microfilament motor activity
GO:0003009 IEA skeletal muscle contraction
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016459 IDA myosin complex
GO:0032982 IEA myosin filament
GO:0043292 IDA contractile fiber
GO:0051015 IEA actin filament binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051361 myhz2-201 protein_coding Danio_rerio 0 3090
ENSDART00000126873 myhz2-001 protein_coding Danio_rerio 0 3090
ENSDART00000098060 myhz1.1-201 protein_coding Danio_rerio 0 3085
ENSDART00000123003 myhz1.1-001 protein_coding Danio_rerio 0 3085
ENSDART00000122889 myhz1.3-001 protein_coding Danio_rerio 0 3085
ENSDART00000098072 myhz1.1-202 protein_coding Danio_rerio 0 3083
ENSDART00000051362 myhc4-201 protein_coding Danio_rerio 0 3051
ENSDART00000125917 myhc4-001 protein_coding Danio_rerio 0 3051
ENSDART00000131983 myhz1.2-001 protein_coding Danio_rerio 0 3046
ENSDART00000109263 myhz1.1-203 protein_coding Danio_rerio 0 3037
ENSDART00000098067 myhz1.2-201 protein_coding Danio_rerio 0 3033
ENSDART00000051360 MYH13 (3 of 10)-201 protein_coding Danio_rerio 0 3007
ENSDART00000139917 myha-001 protein_coding Danio_rerio 0 2996
ENSDART00000026257 myhb-201 protein_coding Danio_rerio 0 2737
ENSDART00000156295 myhb-001 protein_coding Danio_rerio 0 2737
ENSDART00000133338 CR450736.2-201 protein_coding Danio_rerio 0 2717
ENSDART00000066527 smyhc3-201 protein_coding Danio_rerio 0 2704
ENSDART00000150060 smyhc3-001 protein_coding Danio_rerio 0 2704
ENSDART00000150162 si:ch211-24n20.3-001 protein_coding Danio_rerio 0 2687
ENSDART00000137989 CU633479.5-201 protein_coding Danio_rerio 0 2673
ENSDART00000135233 si:ch211-24n20.3-201 protein_coding Danio_rerio 0 2654
ENSDART00000137082 CU633479.6-201 protein_coding Danio_rerio 0 2649
ENSDART00000056849 smyhc2-001 protein_coding Danio_rerio 0 2521
ENSDART00000056853 smyhc1-203 protein_coding Danio_rerio 0 2483
ENSDART00000123920 MYH13 (5 of 10)-202 protein_coding Danio_rerio 0 2442
ENSDART00000128784 vmhcl-001 protein_coding Danio_rerio 0 1984
ENSDART00000078958 vmhcl-201 protein_coding Danio_rerio 0 1921
ENSDART00000099532 vmhc-001 protein_coding Danio_rerio 0 1478
ENSDART00000130531 myhz1.3-202 protein_coding Danio_rerio 0 1378
ENSDART00000135295 MYH13 (9 of 10)-201 protein_coding Danio_rerio 0 1136
ENSDART00000045928 smyhc1-202 protein_coding Danio_rerio 0 1075
ENSDART00000004536 smyhc1-201 protein_coding Danio_rerio 0 1068
ENSDART00000127125 myhz1.3-201 protein_coding Danio_rerio 0 732
ENSDART00000122669 myha-202 protein_coding Danio_rerio 0 521
ENSDART00000124862 smyhc2-003 protein_coding Danio_rerio 0 387
ENSDART00000098111 myha-201 protein_coding Danio_rerio 0 375
ENSDART00000147211 smyhc2-002 retained_intron Danio_rerio 3e-35 156
ENSDART00000149020 si:ch211-158m24.12-001 protein_coding Danio_rerio 6e-22 111
ENST00000226207 MYH1-001 protein_coding Homo_sapiens 0 4202
ENST00000245503 MYH2-001 protein_coding Homo_sapiens 0 4163
ENST00000252172 MYH13-001 protein_coding Homo_sapiens 0 3546
ENST00000255381 MYH4-001 protein_coding Homo_sapiens 0 4030
ENST00000262873 MYH7B-001 protein_coding Homo_sapiens 0 1823
ENST00000355349 MYH7-001 protein_coding Homo_sapiens 0 3293
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 3415
ENST00000397183 MYH2-201 protein_coding Homo_sapiens 0 4163
ENST00000403437 MYH8-001 protein_coding Homo_sapiens 0 4065
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 3415
ENST00000418404 MYH13-003 protein_coding Homo_sapiens 0 3546
ENST00000420805 MYH2-002 protein_coding Homo_sapiens 0 414
ENST00000439784 MYH16-001 unitary_pseudogene Homo_sapiens 0 689
ENST00000453194 MYH16-002 processed_transcript Homo_sapiens 0 206
ENST00000532183 MYH2-006 protein_coding Homo_sapiens 0 1578
ENST00000557461 MYH6-002 retained_intron Homo_sapiens 0 1029
ENST00000577963 MYH3-002 retained_intron Homo_sapiens 0 294
ENST00000578017 MYH2-009 protein_coding Homo_sapiens 0 490
ENST00000579489 MYH3-004 retained_intron Homo_sapiens 0 460
ENST00000579928 MYH3-003 retained_intron Homo_sapiens 0 453
ENST00000583535 MYH3-001 protein_coding Homo_sapiens 0 7564
ENST00000618182 MYH7B-201 protein_coding Homo_sapiens 0 1823
ENST00000621918 MYH13-201 protein_coding Homo_sapiens 0 3546
ENST00000622564 MYH2-202 protein_coding Homo_sapiens 0 1578

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