C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy chain 13, skeletal muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123920 MYH13 (5 of 10)-202 ENSDARG00000053207 7955 + 22:328018-338481 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleENSDART00000123920
Transcript ID Brain Kidney Liver Muscle
ENSDART00000123920 0.116±0.04 3.182±0.00 0.011±0.00 87.954±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007301 Myh3-201 protein_coding Mus_musculus 0 2442
ENSMUST00000018561 Myo1b-002 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000018632 Myh4-001 protein_coding Mus_musculus 0 3001
ENSMUST00000018637 Myh1-003 protein_coding Mus_musculus 0 3205
ENSMUST00000018641 Myh2-001 protein_coding Mus_musculus 0 2955
ENSMUST00000019625 Myh8-001 protein_coding Mus_musculus 0 2996
ENSMUST00000046390 Myo1b-001 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000075734 Myh1-201 protein_coding Mus_musculus 0 3205
ENSMUST00000081857 Myh6-201 protein_coding Mus_musculus 0 2124
ENSMUST00000081911 Myh13-201 protein_coding Mus_musculus 0 2388
ENSMUST00000092995 Myh7b-001 protein_coding Mus_musculus 0 486
ENSMUST00000102803 Myh7-001 protein_coding Mus_musculus 0 2185
ENSMUST00000108684 Myh13-001 protein_coding Mus_musculus 0 2388
ENSMUST00000108685 Myh8-003 protein_coding Mus_musculus 0 279
ENSMUST00000108686 Myh8-002 retained_intron Mus_musculus 0 1637
ENSMUST00000108689 Myh3-001 protein_coding Mus_musculus 0 2442
ENSMUST00000114537 Myo1b-003 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000114541 Myo1b-013 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000124516 Myh1-001 protein_coding Mus_musculus 0 3205
ENSMUST00000135125 Myo1b-007 processed_transcript Mus_musculus 0.00000001 64
ENSMUST00000139052 Myh8-004 retained_intron Mus_musculus 0 568
ENSMUST00000144694 Myo1b-006 protein_coding Mus_musculus 0.000000000005 77
ENSMUST00000145322 Myh6-001 protein_coding Mus_musculus 0 1543
ENSMUST00000149852 Myh7-002 retained_intron Mus_musculus 0 665
ENSMUST00000151525 Myo1b-004 retained_intron Mus_musculus 0.00000000001 77
ENSMUST00000165221 Myh3-202 protein_coding Mus_musculus 0 2442
ENSMUST00000168485 Myh7-201 protein_coding Mus_musculus 0 2185
ENSMUST00000170159 Myh2-201 protein_coding Mus_musculus 0 2955
ENSMUST00000170942 Myh4-201 protein_coding Mus_musculus 0 3001
ENSMUST00000180845 Myh13-002 protein_coding Mus_musculus 0 2388
ENST00000226207 MYH1-001 protein_coding Homo_sapiens 0 3003
ENST00000245503 MYH2-001 protein_coding Homo_sapiens 0 2793
ENST00000252172 MYH13-001 protein_coding Homo_sapiens 0 2466
ENST00000255381 MYH4-001 protein_coding Homo_sapiens 0 3142
ENST00000355349 MYH7-001 protein_coding Homo_sapiens 0 2073
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 2050
ENST00000397183 MYH2-201 protein_coding Homo_sapiens 0 2793
ENST00000403437 MYH8-001 protein_coding Homo_sapiens 0 2769
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 2050
ENST00000418404 MYH13-003 protein_coding Homo_sapiens 0 2466
ENST00000420805 MYH2-002 protein_coding Homo_sapiens 0 298
ENST00000439784 MYH16-001 unitary_pseudogene Homo_sapiens 0 497
ENST00000453194 MYH16-002 processed_transcript Homo_sapiens 2e-39 167
ENST00000532183 MYH2-006 protein_coding Homo_sapiens 0 1201
ENST00000578017 MYH2-009 protein_coding Homo_sapiens 0 401
ENST00000579489 MYH3-004 retained_intron Homo_sapiens 0 220
ENST00000583535 MYH3-001 protein_coding Homo_sapiens 0 2342
ENST00000621918 MYH13-201 protein_coding Homo_sapiens 0 2466
ENST00000622564 MYH2-202 protein_coding Homo_sapiens 0 1201

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