C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy chain 3, skeletal muscle, embryonic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000583535 MYH3-001 ENSG00000109063 9606 - 17:10628527-10657309 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000583535
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000583535 0.036±0.00 2.606±0.00 0.304±0.00 0.229±0.07 0.082±0.05 4.445±0.00 0.111±0.00 0.668±0.48 0.333±0.00 0.087±0.04 2.626±2.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IMP microfilament motor activity
GO:0003009 IMP skeletal muscle contraction
GO:0003774 IEA motor activity
GO:0005515 IEA protein binding
GO:0005516 NAS calmodulin binding
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0005859 NAS muscle myosin complex
GO:0006200 IMP ATP catabolic process
GO:0007517 TAS muscle organ development
GO:0016459 IEA myosin complex
GO:0030017 NAS sarcomere
GO:0030048 NAS actin filament-based movement
GO:0030049 TAS muscle filament sliding
GO:0030326 IC embryonic limb morphogenesis
GO:0032982 IEA myosin filament
GO:0042623 NAS ATPase activity, coupled
GO:0043292 IEA contractile fiber
GO:0045214 NAS sarcomere organization
GO:0051015 IMP actin filament binding
GO:0060325 IC face morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108689 Myh3-001 protein_coding Mus_musculus 0 7564
ENSMUST00000007301 Myh3-201 protein_coding Mus_musculus 0 7555
ENSMUST00000165221 Myh3-202 protein_coding Mus_musculus 0 7550
ENSMUST00000019625 Myh8-001 protein_coding Mus_musculus 0 4335
ENSMUST00000170159 Myh2-201 protein_coding Mus_musculus 0 4331
ENSMUST00000018641 Myh2-001 protein_coding Mus_musculus 0 4331
ENSMUST00000075734 Myh1-201 protein_coding Mus_musculus 0 4270
ENSMUST00000018637 Myh1-003 protein_coding Mus_musculus 0 4270
ENSMUST00000124516 Myh1-001 protein_coding Mus_musculus 0 4270
ENSMUST00000170942 Myh4-201 protein_coding Mus_musculus 0 4145
ENSMUST00000018632 Myh4-001 protein_coding Mus_musculus 0 4145
ENSMUST00000081911 Myh13-201 protein_coding Mus_musculus 0 3428
ENSMUST00000180845 Myh13-002 protein_coding Mus_musculus 0 3428
ENSMUST00000108684 Myh13-001 protein_coding Mus_musculus 0 3428
ENSMUST00000081857 Myh6-201 protein_coding Mus_musculus 0 3184
ENSMUST00000168485 Myh7-201 protein_coding Mus_musculus 0 3179
ENSMUST00000102803 Myh7-001 protein_coding Mus_musculus 0 3179
ENSDART00000125917 myhc4-001 protein_coding Danio_rerio 0 3175
ENSDART00000051362 myhc4-201 protein_coding Danio_rerio 0 3169
ENSDART00000122889 myhz1.3-001 protein_coding Danio_rerio 0 3166
ENSDART00000098072 myhz1.1-202 protein_coding Danio_rerio 0 3099
ENSDART00000098060 myhz1.1-201 protein_coding Danio_rerio 0 3096
ENSDART00000123003 myhz1.1-001 protein_coding Danio_rerio 0 3096
ENSDART00000098067 myhz1.2-201 protein_coding Danio_rerio 0 3094
ENSDART00000131983 myhz1.2-001 protein_coding Danio_rerio 0 3094
ENSDART00000051361 myhz2-201 protein_coding Danio_rerio 0 3085
ENSDART00000126873 myhz2-001 protein_coding Danio_rerio 0 3085
ENSDART00000139917 myha-001 protein_coding Danio_rerio 0 3061
ENSDART00000109263 myhz1.1-203 protein_coding Danio_rerio 0 3046
ENSDART00000051360 MYH13 (3 of 10)-201 protein_coding Danio_rerio 0 2874
ENSDART00000133338 CR450736.2-201 protein_coding Danio_rerio 0 2771
ENSDART00000137989 CU633479.5-201 protein_coding Danio_rerio 0 2712
ENSDART00000156295 myhb-001 protein_coding Danio_rerio 0 2693
ENSDART00000026257 myhb-201 protein_coding Danio_rerio 0 2676
ENSDART00000066527 smyhc3-201 protein_coding Danio_rerio 0 2654
ENSDART00000150060 smyhc3-001 protein_coding Danio_rerio 0 2654
ENSDART00000150162 si:ch211-24n20.3-001 protein_coding Danio_rerio 0 2643
ENSDART00000135233 si:ch211-24n20.3-201 protein_coding Danio_rerio 0 2599
ENSDART00000137082 CU633479.6-201 protein_coding Danio_rerio 0 2564
ENSDART00000056849 smyhc2-001 protein_coding Danio_rerio 0 2495
ENSDART00000056853 smyhc1-203 protein_coding Danio_rerio 0 2464
ENSDART00000123920 MYH13 (5 of 10)-202 protein_coding Danio_rerio 0 2342
ENSMUST00000108686 Myh8-002 retained_intron Mus_musculus 0 2252
ENSDART00000128784 vmhcl-001 protein_coding Danio_rerio 0 2100
ENSDART00000078958 vmhcl-201 protein_coding Danio_rerio 0 2036
ENSMUST00000145322 Myh6-001 protein_coding Mus_musculus 0 1897
ENSDART00000099532 vmhc-001 protein_coding Danio_rerio 0 1546
ENSDART00000130531 myhz1.3-202 protein_coding Danio_rerio 0 1406
ENSDART00000075210 protein_coding Danio_rerio 0 1319
ENSDART00000045928 smyhc1-202 protein_coding Danio_rerio 0 1170
ENSDART00000004536 smyhc1-201 protein_coding Danio_rerio 0 1151
ENSDART00000135295 MYH13 (9 of 10)-201 protein_coding Danio_rerio 0 1075
ENSDART00000130036 MYH13 (5 of 10)-201 protein_coding Danio_rerio 0 977
ENSMUST00000139052 Myh8-004 retained_intron Mus_musculus 0 880
ENSDART00000127125 myhz1.3-201 protein_coding Danio_rerio 0 730
ENSMUST00000092995 Myh7b-001 protein_coding Mus_musculus 0 584
ENSMUST00000181027 Myh13-004 protein_coding Mus_musculus 0 407
ENSDART00000098111 myha-201 protein_coding Danio_rerio 0 385
ENSDART00000124862 smyhc2-003 protein_coding Danio_rerio 0 375
ENSMUST00000108685 Myh8-003 protein_coding Mus_musculus 0 357
ENSDART00000123565 vmhcl-004 protein_coding Danio_rerio 0 268
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 0 213
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 0 213
ENSDART00000141922 vmhcl-002 protein_coding Danio_rerio 1.99965e-42 180
ENSDART00000147211 smyhc2-002 retained_intron Danio_rerio 3e-35 156
ENSMUST00000107900 Myh14-201 protein_coding Mus_musculus 5e-33 148
ENSMUST00000182648 Myh14-007 protein_coding Mus_musculus 5e-33 148
ENSMUST00000048102 Myh14-001 protein_coding Mus_musculus 5e-33 148
ENSMUST00000107899 Myh14-002 protein_coding Mus_musculus 5e-33 148

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