C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, L type, alpha 1C subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112825 Cacna1c-201 ENSMUSG00000051331 10090 - 6:118592319-118757974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleENSMUST00000112825
Transcript ID Breast Liver Muscle
ENSMUST00000112825 0.195±0.00 0.113±0.05 0.078±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002095 IDA caveolar macromolecular signaling complex
GO:0005245 TAS voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005891 TAS voltage-gated calcium channel complex
GO:0006816 IMP calcium ion transport
GO:0006874 IMP cellular calcium ion homeostasis
GO:0006939 IMP smooth muscle contraction
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007268 IMP synaptic transmission
GO:0007628 IGI adult walking behavior
GO:0008217 IMP regulation of blood pressure
GO:0008331 IBA high voltage-gated calcium channel activity
GO:0008542 IMP visual learning
GO:0014069 IEA postsynaptic density
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0017156 IMP calcium ion-dependent exocytosis
GO:0019229 IMP regulation of vasoconstriction
GO:0019899 IPI enzyme binding
GO:0030018 IDA Z disc
GO:0030073 IMP insulin secretion
GO:0030252 IDA growth hormone secretion
GO:0030315 TAS T-tubule
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042593 IMP glucose homeostasis
GO:0043025 IDA neuronal cell body
GO:0043198 IDA dendritic shaft
GO:0046620 IMP regulation of organ growth
GO:0046872 IEA metal ion binding
GO:0051393 IEA alpha-actinin binding
GO:0060083 IMP smooth muscle contraction involved in micturition
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000089956 cacna1da-201 protein_coding Danio_rerio 0 1179
ENSDART00000058276 cacna1da-001 protein_coding Danio_rerio 0 1179
ENSDART00000132909 cacna1c-001 protein_coding Danio_rerio 0 773
ENSDART00000028856 cacna1c-201 protein_coding Danio_rerio 0 752
ENSDART00000100118 cacna1da-202 protein_coding Danio_rerio 0 553
ENSDART00000065375 cacna1db-201 protein_coding Danio_rerio 0 387
ENSDART00000011078 CACNA1F (1 of 2)-201 protein_coding Danio_rerio 0 292
ENST00000288139 CACNA1D-001 protein_coding Homo_sapiens 0 525
ENST00000323022 CACNA1F-001 protein_coding Homo_sapiens 0 1194
ENST00000327702 CACNA1C-023 protein_coding Homo_sapiens 0 1923
ENST00000335762 CACNA1C-015 protein_coding Homo_sapiens 0 3083
ENST00000344100 CACNA1C-021 protein_coding Homo_sapiens 0 1936
ENST00000347598 CACNA1C-017 protein_coding Homo_sapiens 0 3037
ENST00000350061 CACNA1D-003 protein_coding Homo_sapiens 0 525
ENST00000362061 CACNA1S-001 protein_coding Homo_sapiens 0 741
ENST00000367338 CACNA1S-002 protein_coding Homo_sapiens 0 1386
ENST00000376251 CACNA1F-002 protein_coding Homo_sapiens 0 1194
ENST00000376265 CACNA1F-007 protein_coding Homo_sapiens 0 1194
ENST00000399591 CACNA1C-008 protein_coding Homo_sapiens 0 2490
ENST00000399595 CACNA1C-002 protein_coding Homo_sapiens 0 2490
ENST00000399597 CACNA1C-005 protein_coding Homo_sapiens 0 3037
ENST00000399601 CACNA1C-020 protein_coding Homo_sapiens 0 3037
ENST00000399603 CACNA1C-011 protein_coding Homo_sapiens 0 3083
ENST00000399606 CACNA1C-019 protein_coding Homo_sapiens 0 3037
ENST00000399617 CACNA1C-013 protein_coding Homo_sapiens 0 1923
ENST00000399621 CACNA1C-006 protein_coding Homo_sapiens 0 1936
ENST00000399629 CACNA1C-022 protein_coding Homo_sapiens 0 3037
ENST00000399634 CACNA1C-012 protein_coding Homo_sapiens 0 1925
ENST00000399637 CACNA1C-007 protein_coding Homo_sapiens 0 1936
ENST00000399638 CACNA1C-004 protein_coding Homo_sapiens 0 3037
ENST00000399641 CACNA1C-010 protein_coding Homo_sapiens 0 3037
ENST00000399644 CACNA1C-003 protein_coding Homo_sapiens 0 3037
ENST00000399649 CACNA1C-024 protein_coding Homo_sapiens 0 2479
ENST00000399655 CACNA1C-001 protein_coding Homo_sapiens 0 3083
ENST00000402845 CACNA1C-032 protein_coding Homo_sapiens 0 1936
ENST00000406454 CACNA1C-031 protein_coding Homo_sapiens 0 1925
ENST00000422281 CACNA1D-002 protein_coding Homo_sapiens 0 1131
ENST00000465278 CACNA1C-016 protein_coding Homo_sapiens 0 833
ENST00000465934 CACNA1C-025 retained_intron Homo_sapiens 0 667
ENST00000480911 CACNA1C-018 protein_coding Homo_sapiens 0 1886
ENST00000481478 CACNA1D-004 protein_coding Homo_sapiens 0 488
ENST00000483136 CACNA1C-027 processed_transcript Homo_sapiens 3e-36 156
ENST00000491104 CACNA1C-014 processed_transcript Homo_sapiens 2e-28 130
ENST00000492150 CACNA1C-029 retained_intron Homo_sapiens 0 337
ENST00000496818 CACNA1C-026 protein_coding Homo_sapiens 0 562
ENST00000613940 CACNA1C-201 protein_coding Homo_sapiens 0 1923
ENST00000615303 CACNA1C-202 protein_coding Homo_sapiens 0 1923
ENST00000615400 CACNA1C-203 protein_coding Homo_sapiens 0 3083
ENST00000616390 CACNA1C-036 protein_coding Homo_sapiens 0 2992
ENST00000620878 CACNA1C-204 protein_coding Homo_sapiens 0 3310
ENST00000621625 CACNA1C-205 protein_coding Homo_sapiens 0 1923

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