C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, L type, alpha 1D subunit, a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000058276 cacna1da-001 ENSDARG00000024004 7955 - 11:37634336-37726872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENSDART00000058276
Transcript ID Brain Heart Liver
ENSDART00000058276 2.707±0.00 0.043±0.03 0.014±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075591 Cacna1c-024 protein_coding Mus_musculus 0 586
ENSMUST00000078320 Cacna1c-004 protein_coding Mus_musculus 0 586
ENSMUST00000112064 Cacna1s-201 protein_coding Mus_musculus 0 660
ENSMUST00000112068 Cacna1s-001 protein_coding Mus_musculus 0 1081
ENSMUST00000112249 Cacna1d-201 protein_coding Mus_musculus 0 1810
ENSMUST00000112250 Cacna1d-202 protein_coding Mus_musculus 0 1810
ENSMUST00000112790 Cacna1c-005 protein_coding Mus_musculus 0 647
ENSMUST00000112793 Cacna1c-010 protein_coding Mus_musculus 0 647
ENSMUST00000112825 Cacna1c-201 protein_coding Mus_musculus 0 1179
ENSMUST00000160641 Cacna1s-002 protein_coding Mus_musculus 0 660
ENSMUST00000161700 Cacna1s-004 retained_intron Mus_musculus 0 532
ENSMUST00000161865 Cacna1s-003 protein_coding Mus_musculus 0 1081
ENSMUST00000185345 Cacna1c-019 protein_coding Mus_musculus 0 625
ENSMUST00000186889 Cacna1c-001 protein_coding Mus_musculus 0 586
ENSMUST00000187317 Cacna1c-018 protein_coding Mus_musculus 0 564
ENSMUST00000187386 Cacna1c-006 protein_coding Mus_musculus 0 641
ENSMUST00000187474 Cacna1c-008 protein_coding Mus_musculus 0 580
ENSMUST00000187940 Cacna1c-002 protein_coding Mus_musculus 0 641
ENSMUST00000188078 Cacna1c-015 protein_coding Mus_musculus 0 586
ENSMUST00000188106 Cacna1c-011 protein_coding Mus_musculus 0 1206
ENSMUST00000188181 Cacna1c-012 processed_transcript Mus_musculus 0 1179
ENSMUST00000188522 Cacna1c-014 protein_coding Mus_musculus 0 641
ENSMUST00000188865 Cacna1c-020 protein_coding Mus_musculus 0 647
ENSMUST00000189389 Cacna1c-016 protein_coding Mus_musculus 0 580
ENSMUST00000189520 Cacna1c-017 protein_coding Mus_musculus 0 586
ENSMUST00000190285 Cacna1c-007 protein_coding Mus_musculus 0 580
ENST00000288139 CACNA1D-001 protein_coding Homo_sapiens 0 917
ENST00000323022 CACNA1F-001 protein_coding Homo_sapiens 0 1099
ENST00000327702 CACNA1C-023 protein_coding Homo_sapiens 0 726
ENST00000335762 CACNA1C-015 protein_coding Homo_sapiens 0 715
ENST00000344100 CACNA1C-021 protein_coding Homo_sapiens 0 715
ENST00000347598 CACNA1C-017 protein_coding Homo_sapiens 0 652
ENST00000350061 CACNA1D-003 protein_coding Homo_sapiens 0 917
ENST00000357570 CACNA1E-201 protein_coding Homo_sapiens 0.000000001 71
ENST00000358338 CACNA1E-202 protein_coding Homo_sapiens 0.000000003 71
ENST00000360108 CACNA1E-006 protein_coding Homo_sapiens 0.000000001 71
ENST00000362061 CACNA1S-001 protein_coding Homo_sapiens 0 658
ENST00000367338 CACNA1S-002 protein_coding Homo_sapiens 0 1155
ENST00000367567 CACNA1E-203 protein_coding Homo_sapiens 0.000000003 71
ENST00000367570 CACNA1E-001 protein_coding Homo_sapiens 0.000000002 71
ENST00000367573 CACNA1E-003 protein_coding Homo_sapiens 0.000000001 71
ENST00000376251 CACNA1F-002 protein_coding Homo_sapiens 0 1099
ENST00000376265 CACNA1F-007 protein_coding Homo_sapiens 0 1099
ENST00000399591 CACNA1C-008 protein_coding Homo_sapiens 0 1243
ENST00000399595 CACNA1C-002 protein_coding Homo_sapiens 0 1232
ENST00000399597 CACNA1C-005 protein_coding Homo_sapiens 0 652
ENST00000399601 CACNA1C-020 protein_coding Homo_sapiens 0 726
ENST00000399603 CACNA1C-011 protein_coding Homo_sapiens 0 652
ENST00000399606 CACNA1C-019 protein_coding Homo_sapiens 0 715
ENST00000399617 CACNA1C-013 protein_coding Homo_sapiens 0 652
ENST00000399621 CACNA1C-006 protein_coding Homo_sapiens 0 715
ENST00000399629 CACNA1C-022 protein_coding Homo_sapiens 0 664
ENST00000399634 CACNA1C-012 protein_coding Homo_sapiens 0 715
ENST00000399637 CACNA1C-007 protein_coding Homo_sapiens 0 726
ENST00000399638 CACNA1C-004 protein_coding Homo_sapiens 0 652
ENST00000399641 CACNA1C-010 protein_coding Homo_sapiens 0 726
ENST00000399644 CACNA1C-003 protein_coding Homo_sapiens 0 664
ENST00000399649 CACNA1C-024 protein_coding Homo_sapiens 0 1210
ENST00000399655 CACNA1C-001 protein_coding Homo_sapiens 0 715
ENST00000402845 CACNA1C-032 protein_coding Homo_sapiens 0 652
ENST00000406454 CACNA1C-031 protein_coding Homo_sapiens 0 652
ENST00000422281 CACNA1D-002 protein_coding Homo_sapiens 0 1759
ENST00000480911 CACNA1C-018 protein_coding Homo_sapiens 0 664
ENST00000481478 CACNA1D-004 protein_coding Homo_sapiens 0 1003
ENST00000496818 CACNA1C-026 protein_coding Homo_sapiens 0 353
ENST00000613940 CACNA1C-201 protein_coding Homo_sapiens 0 652
ENST00000615303 CACNA1C-202 protein_coding Homo_sapiens 0 652
ENST00000615400 CACNA1C-203 protein_coding Homo_sapiens 0 652
ENST00000620878 CACNA1C-204 protein_coding Homo_sapiens 0 1428
ENST00000621551 CACNA1E-204 protein_coding Homo_sapiens 0.000000003 71
ENST00000621625 CACNA1C-205 protein_coding Homo_sapiens 0 726
ENST00000621791 CACNA1E-002 protein_coding Homo_sapiens 0.000000003 71

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