C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ribosomal protein S15 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000586096  |
RPS15-011 |
ENSG00000115268 |
9606 | + |
19:1438421-1440494  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005ZD | CIL_0005ZD_0002 | CGP | 19:1407569-1440494 |
| CIL_0000ZF | CIL_0000ZF_0001 | CGP | 19:1438358-1473244 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003735 | IEA | structural constituent of ribosome |
| GO:0005840 | IEA | ribosome |
| GO:0006412 | IEA | translation |
| GO:0015935 | IEA | small ribosomal subunit |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000068408
|
Rps15-001 | protein_coding | Mus_musculus | 0 | 422 |
|
ENSMUST00000062674
|
Rps15-002 | protein_coding | Mus_musculus | 0 | 411 |
|
ENSMUST00000121788
|
Rps15-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 409 |
|
ENSDART00000104364
|
rps15-001 | protein_coding | Danio_rerio | 0 | 350 |
|
ENSMUST00000161478
|
Gm6921-001 | processed_pseudogene | Mus_musculus | 0 | 337 |
|
ENSMUST00000116114
|
Gm12947-001 | processed_pseudogene | Mus_musculus | 0 | 270 |
|
ENSMUST00000169588
|
Gm4775-201 | protein_coding | Mus_musculus | 0 | 237 |
|
ENSMUST00000118102
|
Gm8692-001 | processed_pseudogene | Mus_musculus | 1e-35 | 154 |
