C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 9009
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117321 Gm9009-001 ENSMUSG00000080974 10090 + X:94615800-94616125 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000117321
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000117321 0.049±0.00 0.131±0.12 0.064±0.03 1.007±0.34 0.371±0.34 0.227±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341369 PTMA-002 protein_coding Homo_sapiens 0 355
ENST00000397729 PTMAP8-001 processed_pseudogene Homo_sapiens 0 263
ENST00000409115 PTMA-001 protein_coding Homo_sapiens 0 346
ENST00000409321 PTMA-012 protein_coding Homo_sapiens 0 340
ENST00000409683 PTMA-007 protein_coding Homo_sapiens 0 294
ENST00000410064 PTMA-004 protein_coding Homo_sapiens 0 316
ENST00000411648 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000412128 PTMA-008 protein_coding Homo_sapiens 0 307
ENST00000442851 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000444251 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000447774 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000448874 PTMA-011 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000455552 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000456700 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000457022 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000466801 PTMA-013 processed_transcript Homo_sapiens 0 311
ENST00000467816 PTMA-010 retained_intron Homo_sapiens 0 198
ENST00000468027 PTMA-006 retained_intron Homo_sapiens 0 300
ENST00000481928 PTMA-003 retained_intron Homo_sapiens 0 239
ENST00000612829 PTMA-201 protein_coding Homo_sapiens 0 311

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