C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11826
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118781 Gm11826-001 ENSMUSG00000083328 10090 - 4:13482755-13483192 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000118781
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000118781 0.084±0.03 0.894±0.00 0.827±1.36 0.196±0.00 0.629±0.14 0.173±0.10 0.124±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007O2 CIL_0007O2_0004 UCNEbase 4:12306673-14026114
CIL_00015G CIL_00015G_0002 CGP 4:12906838-13893649

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293842 RPL26-001 protein_coding Homo_sapiens 0 512
ENST00000414397 RP11-524O24.2-001 processed_pseudogene Homo_sapiens 0 346
ENST00000424037 RP11-416L21.1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000431047 AC005534.6-001 processed_pseudogene Homo_sapiens 0 414
ENST00000450941 AC022431.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000451325 RP11-445P17.5-001 processed_pseudogene Homo_sapiens 0 340
ENST00000472981 RP11-796G6.1-001 processed_pseudogene Homo_sapiens 0 462
ENST00000495104 RP11-366M4.2-001 processed_pseudogene Homo_sapiens 0 420
ENST00000495560 AC090453.1-001 processed_pseudogene Homo_sapiens 0 316
ENST00000578115 RPL26-002 retained_intron Homo_sapiens 0 213
ENST00000578812 RPL26-003 protein_coding Homo_sapiens 0 368
ENST00000582471 KRBA2-001 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000582485 RPL26-013 protein_coding Homo_sapiens 0 433
ENST00000582556 RPL26-005 protein_coding Homo_sapiens 0 512
ENST00000583011 RPL26-007 protein_coding Homo_sapiens 0 512
ENST00000583515 RPL26-006 protein_coding Homo_sapiens 0 340
ENST00000584164 RPL26-004 protein_coding Homo_sapiens 0 512
ENST00000584343 RPL26-008 protein_coding Homo_sapiens 0 379
ENST00000584906 RPL26-010 nonsense_mediated_decay Homo_sapiens 0 211

Loading