C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450941 AC022431.1-001 ENSG00000226221 9606 - 5:56504635-56505072 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000450941
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000450941 0.032±0.00 0.034±0.00 0.201±0.10 0.267±0.00 0.090±0.00 0.030±0.00 0.129±0.03 0.147±0.00 0.282±0.19 0.229±0.00 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EO CIL_0008EO_0001 VISTA 5:56300346-56903242
CIL_00089D CIL_00089D_0001 VISTA 5:56348801-56951831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118533 Gm15772-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000183196 Gm10136-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000167436 Rpl26-201 protein_coding Mus_musculus 0 481
ENSMUST00000073471 Rpl26-001 protein_coding Mus_musculus 0 481
ENSMUST00000118781 Gm11826-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000085379 Rpl26-ps2-201 processed_pseudogene Mus_musculus 0 448
ENSMUST00000101014 Rpl26-002 protein_coding Mus_musculus 0 448
ENSMUST00000122220 Rpl26-ps5-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000170279 Rpl26-ps4-201 processed_pseudogene Mus_musculus 0 425
ENSMUST00000118045 Gm15896-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000128952 Rpl26-003 protein_coding Mus_musculus 0 350
ENSMUST00000122414 Gm11506-001 processed_pseudogene Mus_musculus 0 298

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