C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12242
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118824 Gm12242-001 ENSMUSG00000082476 10090 + 11:57449107-57449844 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverPlacentaENSMUST00000118824
Transcript ID Adipose Bladder Brain Liver Placenta
ENSMUST00000118824 0.078±0.01 0.019±0.01 0.023±0.01 0.005±0.00 0.037±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UG CIL_0001UG_0002 CGP 11:57011387-57518617
CIL_0009C8 CIL_0009C8_0002 VISTA 11:57350678-57952744
CIL_00094E CIL_00094E_0002 VISTA 11:57350713-57952688

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315377 RPS6-003 protein_coding Homo_sapiens 0 737
ENST00000366455 AC007618.3-001 processed_pseudogene Homo_sapiens 0 311
ENST00000380384 RPS6-002 protein_coding Homo_sapiens 0 737
ENST00000380394 RPS6-001 protein_coding Homo_sapiens 0 745
ENST00000393214 AC004386.4-001 processed_pseudogene Homo_sapiens 0 427
ENST00000463969 RP11-864G5.1-001 processed_pseudogene Homo_sapiens 0 544
ENST00000464444 AD000092.3-001 processed_pseudogene Homo_sapiens 0 560
ENST00000475592 RP11-392P7.1-001 processed_pseudogene Homo_sapiens 0 575
ENST00000479691 RPS6P16-001 processed_pseudogene Homo_sapiens 0 436
ENST00000498815 RPS6-005 processed_transcript Homo_sapiens 0 279

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