C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12266
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120311 Gm12266-001 ENSMUSG00000082148 10090 + 11:60343245-60344206 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120311
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120311 0.314±0.16 0.301±0.21 0.071±0.00 0.252±0.09 0.292±0.12 0.207±0.07 0.682±0.16 0.127±0.07 0.365±0.26 0.054±0.01 0.279±0.21 0.089±0.06 0.131±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003N CIL_00003N_0003 CGP 11:60199089-60352905
CIL_00058R CIL_00058R_0003 CGP 11:60226714-60394341

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 6e-25 119
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 641
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 512
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 630
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 641
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 641
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 540
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 520
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 564
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 486
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 451
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 351
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 390
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 420
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 189
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 355
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 363
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 512
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 512
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 407
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 455
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 516
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 4e-37 159
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 555
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 516
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 244
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 545

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